AT3G22330 (PMH2, ATRH53)


Aliases : PMH2, ATRH53

Description : putative mitochondrial RNA helicase 2


Gene families : OG_01_0001864 (Gene family) Phylogenetic Tree(s): OG0001864_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G22330
Cluster HCCA cluster: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.151 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 1138... 0.02 Gene family
LOC_Os07g05050 Os07g0143700 27.1.2 RNA.processing.RNA helicase DEAD-box protein... 0.04 Gene family
LOC_Os12g41715 Os12g0611200 27.1.2 RNA.processing.RNA helicase DEAD-box protein... 0.04 Gene family
Zm00001d031050 GRMZM2G107984 27.1.2 RNA.processing.RNA helicase DEAD-box protein... 0.04 Gene family
Zm00001d041480 GRMZM2G565140 27.1.2 RNA.processing.RNA helicase DEAD-box protein... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IMP Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
MF GO:0008026 ATP-dependent helicase activity ISS Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 341 443
IPR011545 DEAD/DEAH_box_helicase_dom 128 295
No external refs found!