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  5. Nbi_g21882

Nbi_g21882


Description : not classified & original description: none


Gene families : OG0006520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21882

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00229710 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp4g02260.1 No alias DExH-box ATP-dependent RNA helicase DExH8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g48041 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo441970 No alias DExH-box ATP-dependent RNA helicase DExH8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e025569_P001 Zm00001e025569 Zinc finger CCCH domain-containing protein 4 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019446 BMT5-like 825 981
IPR000571 Znf_CCCH 738 759
IPR011545 DEAD/DEAH_box_helicase_dom 43 183
IPR001650 Helicase_C 265 390
IPR041367 Znf-CCCH_4 766 786
No external refs found!