AT3G22170 (FHY3)

Aliases : FHY3

Description : far-red elongated hypocotyls 3

Gene families : OG_01_0012447 (Gene family) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G22170
Cluster HCCA cluster: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Solyc07g043270.3.1 Solyc07g043270.3 30.11 signalling.light A component of the PHYA signaling... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process RCA
MF GO:0003700 DNA-binding transcription factor activity IDA
CC GO:0005634 nucleus IDA
CC GO:0005634 nucleus ISM
BP GO:0006487 protein N-linked glycosylation RCA
BP GO:0007623 circadian rhythm IMP
BP GO:0008284 positive regulation of cell proliferation RCA
BP GO:0009585 red, far-red light phototransduction IMP
BP GO:0009630 gravitropism RCA
BP GO:0009639 response to red or far red light RCA
BP GO:0010017 red or far-red light signaling pathway IMP
BP GO:0010218 response to far red light IMP
BP GO:0010218 response to far red light IEP
BP GO:0042753 positive regulation of circadian rhythm IMP
BP GO:0045893 positive regulation of transcription, DNA-templated IDA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 84 186
IPR018289 MULE_transposase_dom 284 376
No external refs found!