Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0010399 (Gene family) Phylogenetic Tree(s): OG0010399_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G22150
Cluster HCCA cluster: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g51350 Os04g0602600 35.1.5 not ontology.pentatricopeptide (PPR)... 0.09 Gene family
Solyc11g017370.2.1 Solyc11g017370.2 35.1.5 not ontology.pentatricopeptide (PPR)... 0.13 Gene family
Zm00001d002421 GRMZM2G456123 35.1.5 not ontology.pentatricopeptide (PPR)... 0.1 Gene family

Type GO Term Name Evidence Source
BP GO:0016556 mRNA modification RCA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 71 98
IPR002885 Pentatricopeptide_repeat 284 307
IPR002885 Pentatricopeptide_repeat 485 531
IPR002885 Pentatricopeptide_repeat 177 220
IPR002885 Pentatricopeptide_repeat 383 428
IPR002885 Pentatricopeptide_repeat 586 632
No external refs found!