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  5. Nbi_g21845

Nbi_g21845 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : not classified & original description: none


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21845

Target Alias Description ECC score Gene Family Method Actions
Adi_g007671 CID11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116982 CID10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35193 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13697 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11106 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40102 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01661 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19559 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01762.t2 CID12, ATRBP37,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012066 CID12, ATRBP37, RBP37 not classified & original description: CDS=1-1341 0.07 OrthoFinder output from all 47 species
Cba_g07610 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g50091 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G070900.1 CID12, ATRBP37,... not classified & original description: pacid=50605247... 0.04 OrthoFinder output from all 47 species
Ceric.30G073000.1 CID11, Ceric.30G073000 not classified & original description: pacid=50609234... 0.04 OrthoFinder output from all 47 species
Dcu_g13884 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07278 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02795 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17641 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57945 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02187 CID12, ATRBP37, RBP37 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g12178 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc10g007590.4.1 CID9, Solyc10g007590 Polyadenylate-binding protein-interacting protein 9... 0.03 OrthoFinder output from all 47 species
Tin_g04083 CID12, ATRBP37, RBP37 not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 378 445
IPR000504 RRM_dom 281 343
IPR009818 Ataxin-2_C 219 234
No external refs found!