AT3G21090


Description : ABC-2 type transporter family protein


Gene families : OG_01_0000329 (Gene family) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G21090
Cluster HCCA cluster: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g22284 Os12g0411700 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_10436774g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_69480g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo171321 PACid_15408019 No description available 0.02 Gene family
Solyc01g105450.3.1 Solyc01g105450.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc03g019760.3.1 Solyc03g019760.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc06g072100.2.1 Solyc06g072100.2 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d010426 GRMZM2G157564 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d048621 GRMZM2G308860 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0009062 fatty acid catabolic process RCA Arabidopsis.org
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISS Arabidopsis.org
BP GO:0080167 response to karrikin IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 47 197
IPR013525 ABC_2_trans 361 568
No external refs found!