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  5. Nbi_g21624

Nbi_g21624 (ATG8B)


Aliases : ATG8B

Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0003042 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0003042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21624

Target Alias Description ECC score Gene Family Method Actions
Als_g60098 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 39 species
Als_g60304 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 39 species
Aob_g15536 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 39 species
Aob_g40594 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 39 species
Aop_g51623 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 39 species
Cba_g68643 ATG8A, APG8A autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 39 species
Cba_g78965 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 39 species
Dcu_g34113 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 39 species
Dcu_g43805 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.1 OrthoFinder output from all 39 species
Dde_g36454 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 39 species
Dde_g39581 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 39 species
Ehy_g19614 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 39 species
Lfl_g18741 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 39 species
Nbi_g44176 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 39 species
Pir_g39283 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 39 species
Ppi_g12768 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.07 OrthoFinder output from all 39 species
Ppi_g19066 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 39 species
Ppi_g47755 ATG8B autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 39 species
Sam_g39855 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 13 116
No external refs found!