AT3G19380 (PUB25)


Aliases : PUB25

Description : plant U-box 25


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G19380
Cluster HCCA cluster: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G35930 PUB23 plant U-box 23 0.04 Gene family
AT3G11840 PUB24 plant U-box 24 0.02 Gene family
AT5G09800 No alias ARM repeat superfamily protein 0.03 Gene family
GSVIVT01011139001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01011140001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01026764001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
GSVIVT01031720001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os08g04470 Os08g0139400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10432813g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.05 Gene family
MA_69133g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo172230 PACid_15410363 No description available 0.02 Gene family
Smo416356 PACid_15422407 No description available 0.04 Gene family
Smo426053 PACid_15404973 No description available 0.02 Gene family
Solyc01g007040.3.1 Solyc01g007040.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g107980.3.1 Solyc01g107980.3 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
Solyc06g074140.1.1 Solyc06g074140.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc09g025270.3.1 Solyc09g025270.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.03 Gene family
Zm00001d001769 GRMZM2G013776 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d023480 GRMZM2G031624 35.1 not assigned.no ontology TTF-type zinc finger... 0.03 Gene family
Zm00001d025379 GRMZM2G059042 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 14 86
No external refs found!