AT1G15980 (NDH48, NDF1)


Aliases : NDH48, NDF1

Description : NDH-dependent cyclic electron flow 1


Gene families : OG_01_0008774 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008774_tree ,
OG_02_0009200 (LandPlants) Phylogenetic Tree(s): OG_02_0009200_tree ,
OG_03_0011496 (SeedPlants) Phylogenetic Tree(s): OG_03_0011496_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G15980
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00210500 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.16 Archaeplastida
GSVIVT01015957001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.27 Archaeplastida
LOC_Os08g17390.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.05 Archaeplastida
Mp4g06360.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.05 Archaeplastida
Pp3c15_23280V3.1 No alias NDH-dependent cyclic electron flow 1 0.09 Archaeplastida
Pp3c9_19250V3.1 No alias NDH-dependent cyclic electron flow 1 0.08 Archaeplastida
Solyc03g116870.3.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.27 Archaeplastida
Zm00001e022142_P001 No alias component PnsB1/NDF1 of NDH subcomplex B 0.11 Archaeplastida
Zm00001e039879_P005 No alias component PnsB1/NDF1 of NDH subcomplex B 0.23 Archaeplastida
AMTR_s00065p00210500 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.14 LandPlants
GSVIVT01015957001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.26 LandPlants
LOC_Os08g17390.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.04 LandPlants
Mp4g06360.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.04 LandPlants
Pp3c15_23280V3.1 No alias NDH-dependent cyclic electron flow 1 0.08 LandPlants
Pp3c9_19250V3.1 No alias NDH-dependent cyclic electron flow 1 0.07 LandPlants
Solyc03g116870.3.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.25 LandPlants
Zm00001e022142_P001 No alias component PnsB1/NDF1 of NDH subcomplex B 0.11 LandPlants
Zm00001e039879_P005 No alias component PnsB1/NDF1 of NDH subcomplex B 0.23 LandPlants
AMTR_s00065p00210500 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.13 SeedPlants
GSVIVT01015957001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.25 SeedPlants
LOC_Os08g17390.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.04 SeedPlants
Solyc03g116870.3.1 No alias component PnsB1/NDF1 of NDH subcomplex B 0.25 SeedPlants
Zm00001e022142_P001 No alias component PnsB1/NDF1 of NDH subcomplex B 0.11 SeedPlants
Zm00001e039879_P005 No alias component PnsB1/NDF1 of NDH subcomplex B 0.22 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
BP GO:0009773 photosynthetic electron transport in photosystem I IMP Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IDA Interproscan
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IMP Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0016117 carotenoid biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!