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  5. AT3G18773

AT3G18773


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G18773
Cluster HCCA cluster: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.04 Gene family
AT1G49210 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Gene family
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Gene family
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.06 Gene family
AT4G09120 No alias RING/U-box superfamily protein 0.04 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.04 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.03 Gene family
GSVIVT01022306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01026703001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g15100 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os03g28080 Os03g0398600 No description available 0.02 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os05g29676 Os05g0359833 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os06g34870 Os06g0539900,... No description available 0.06 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.05 Gene family
LOC_Os10g39450 Os10g0540000 No description available 0.03 Gene family
LOC_Os12g40460 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_101154g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10244600g0010 No alias No description available 0.04 Gene family
MA_10429091g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_159453g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_226198g0010 No alias No description available 0.02 Gene family
MA_289646g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
MA_6931619g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_6934973g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.07 Gene family
Solyc08g076830.1.1 Solyc08g076830.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.02 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d007609 GRMZM2G041549 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d017678 GRMZM2G004480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d023341 GRMZM2G467576 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d037019 GRMZM2G026562 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43 0.02 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d037943 GRMZM2G340444 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d038766 GRMZM2G482046 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d040638 No alias No description available 0.05 Gene family
Zm00001d045077 GRMZM2G151913 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d047068 GRMZM2G368765 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 129 172
No external refs found!