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  5. Nbi_g21481

Nbi_g21481


Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21481
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Als_g64094 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g56426 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20688.t1 Aspi01Gene20688 component *(RPP1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre17.g738300 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
MA_90134g0010 No alias component RPP1 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp6g11950.1 No alias component RPP1 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c20_2800V3.1 Pp3c20_2800 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Pp3c23_18100V3.1 Pp3c23_18100 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Sam_g20755 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g34210 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!