AT3G15540 (MSG2, IAA19)

Aliases : MSG2, IAA19

Description : indole-3-acetic acid inducible 19

Gene families : OG_01_0009009 (Gene family) Phylogenetic Tree(s): OG0009009_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT3G15540
Cluster	HCCA cluster: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc03g120380.3.1	Solyc03g120380.3	27.3.40 RNA.regulation of transcription.Aux/IAA family...	0.04	Gene family

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Arabidopsis.org
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Arabidopsis.org
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Arabidopsis.org
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	NAS	Arabidopsis.org
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009638	phototropism	NAS	Arabidopsis.org
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	RCA	Arabidopsis.org
BP	GO:0009733	response to auxin	TAS	Arabidopsis.org
BP	GO:0009733	response to auxin	NAS	Arabidopsis.org
BP	GO:0009741	response to brassinosteroid	RCA	Arabidopsis.org
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048527	lateral root development	RCA	Arabidopsis.org
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0080086	stamen filament development	IMP	Arabidopsis.org
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	26	188

External Links

No external refs found!

AT3G15540 (MSG2, IAA19)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation