AT3G13960 (GRF5, AtGRF5)


Aliases : GRF5, AtGRF5

Description : growth-regulating factor 5


Gene families : OG_01_0000333 (Gene family) Phylogenetic Tree(s): OG0000333_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G13960
Cluster HCCA cluster: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT2G36400 GRF3, AtGRF3 growth-regulating factor 3 0.04 Gene family
AT3G52910 GRF4, AtGRF4 growth-regulating factor 4 0.03 Gene family
AT4G24150 AtGRF8, GRF8 growth-regulating factor 8 0.03 Gene family
GSVIVT01015095001 No alias 27.3.50 RNA.regulation of transcription.General... 0.07 Gene family
GSVIVT01016762001 No alias 27.3.50 RNA.regulation of transcription.General... 0.06 Gene family
GSVIVT01019667001 No alias 35.2 not assigned.unknown Growth regulating factor... 0.02 Gene family
GSVIVT01019913001 No alias 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
GSVIVT01024326001 No alias 27.3.50 RNA.regulation of transcription.General... 0.07 Gene family
GSVIVT01027535001 No alias 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
GSVIVT01033800001 No alias 27.3.50 RNA.regulation of transcription.General... 0.05 Gene family
GSVIVT01038629001 No alias 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
LOC_Os02g45570 Os02g0678800 27.3.50 RNA.regulation of transcription.General... 0.1 Gene family
LOC_Os02g47280 Os02g0701300 27.3.50 RNA.regulation of transcription.General... 0.1 Gene family
LOC_Os02g53690 Os02g0776900 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
LOC_Os04g48510 Os04g0574500 27.3.50 RNA.regulation of transcription.General... 0.05 Gene family
LOC_Os06g02560 Os06g0116200 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
LOC_Os06g10310 Os06g0204800 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family
LOC_Os07g28430 Os07g0467500 27.3.50 RNA.regulation of transcription.General... 0.01 Gene family
MA_111469g0010 No alias 27.3.50 RNA.regulation of transcription.General... 0.05 Gene family
MA_137877g0010 No alias 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
MA_18836g0010 No alias 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family
Solyc01g091540.2.1 Solyc01g091540.2 27.3.83 RNA.regulation of transcription.GRF zinc finger... 0.1 Gene family
Solyc03g082430.1.1 Solyc03g082430.1 35.2 not assigned.unknown Growth regulating factor... 0.1 Gene family
Solyc07g041640.3.1 Solyc07g041640.3 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family
Solyc08g005430.3.1 Solyc08g005430.3 27.3.50 RNA.regulation of transcription.General... 0.1 Gene family
Solyc08g075950.2.1 Solyc08g075950.2 27.3.50 RNA.regulation of transcription.General... 0.1 Gene family
Solyc08g079800.3.1 Solyc08g079800.3 27.3.50 RNA.regulation of transcription.General... 0.01 Gene family
Solyc10g083510.2.1 Solyc10g083510.2 27.3.50 RNA.regulation of transcription.General... 0.09 Gene family
Solyc12g096070.2.1 Solyc12g096070.2 27.3.50 RNA.regulation of transcription.General... 0.09 Gene family
Zm00001d000238 GRMZM2G067743 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
Zm00001d017602 GRMZM2G045977 27.3.50 RNA.regulation of transcription.General... 0.07 Gene family
Zm00001d017742 GRMZM2G034876 27.3.50 RNA.regulation of transcription.General... 0.07 Gene family
Zm00001d026240 GRMZM2G129147 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
Zm00001d035965 GRMZM2G098594 27.3.50 RNA.regulation of transcription.General... 0.06 Gene family
Zm00001d037117 GRMZM5G850129 27.3.50 RNA.regulation of transcription.General... 0.09 Gene family
Zm00001d045533 GRMZM2G119359 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
Zm00001d051456 GRMZM2G124566 27.3.50 RNA.regulation of transcription.General... 0.06 Gene family
Zm00001d052112 GRMZM2G105335 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0009737 response to abscisic acid RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
BP GO:0009845 seed germination RCA Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010162 seed dormancy process RCA Arabidopsis.org
BP GO:0016570 histone modification RCA Arabidopsis.org
BP GO:0048366 leaf development IMP Arabidopsis.org
BP GO:0048366 leaf development TAS Arabidopsis.org
BP GO:0048449 floral organ formation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014977 WRC_dom 82 122
IPR014978 Gln-Leu-Gln_QLQ 16 50
No external refs found!