AT3G13870 (RHD3)


Aliases : RHD3

Description : Root hair defective 3 GTP-binding protein (RHD3)


Gene families : OG_01_0001151 (Gene family) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G13870
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016855001 No alias 33.99 development.unspecified Root hair defective 3... 0.06 Gene family
LOC_Os01g39310 Os01g0575000 33.99 development.unspecified required for regulated... 0.02 Gene family
Smo73603 PACid_15408298 33.99 development.unspecified required for regulated... 0.03 Gene family
Zm00001d011213 No alias 33.99 development.unspecified required for regulated... 0.06 Gene family
Zm00001d030998 GRMZM2G052619 33.99 development.unspecified Root hair defective 3... 0.03 Gene family
Zm00001d044271 GRMZM5G838579,... 33.99 development.unspecified required for regulated... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis RCA Arabidopsis.org
MF GO:0005525 GTP binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005783 endoplasmic reticulum IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0006820 anion transport RCA Arabidopsis.org
BP GO:0006862 nucleotide transport RCA Arabidopsis.org
BP GO:0006865 amino acid transport RCA Arabidopsis.org
BP GO:0006886 intracellular protein transport RCA Arabidopsis.org
BP GO:0006888 ER to Golgi vesicle-mediated transport IMP Arabidopsis.org
BP GO:0006888 ER to Golgi vesicle-mediated transport RCA Arabidopsis.org
BP GO:0009832 plant-type cell wall biogenesis IMP Arabidopsis.org
BP GO:0009932 cell tip growth IMP Arabidopsis.org
BP GO:0009932 cell tip growth RCA Arabidopsis.org
BP GO:0010053 root epidermal cell differentiation IMP Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0015696 ammonium transport RCA Arabidopsis.org
BP GO:0015802 basic amino acid transport RCA Arabidopsis.org
BP GO:0016049 cell growth RCA Arabidopsis.org
BP GO:0016051 carbohydrate biosynthetic process RCA Arabidopsis.org
BP GO:0030036 actin cytoskeleton organization IMP Arabidopsis.org
BP GO:0030243 cellulose metabolic process RCA Arabidopsis.org
BP GO:0043069 negative regulation of programmed cell death RCA Arabidopsis.org
BP GO:0043090 amino acid import RCA Arabidopsis.org
BP GO:0043269 regulation of ion transport RCA Arabidopsis.org
BP GO:0048193 Golgi vesicle transport RCA Arabidopsis.org
BP GO:0048527 lateral root development RCA Arabidopsis.org
BP GO:0048765 root hair cell differentiation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008803 RHD3/Sey1 43 784
No external refs found!