AT3G13120


Description : Ribosomal protein S10p/S20e family protein


Gene families : OG_01_0006938 (Gene family) Phylogenetic Tree(s): OG0006938_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G13120
Cluster HCCA cluster: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre03.g195650 No alias 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.24 Gene family
GSVIVT01014640001 No alias 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os03g10060 Os03g0196800 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.05 Gene family
MA_10432148g0010 No alias 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.07 Gene family
Smo118761 PACid_15410950 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.04 Gene family
Solyc10g006030.3.1 Solyc10g006030.3 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.24 Gene family
Zm00001d028153 GRMZM2G047513 29.2.1.1.1.1.10 protein.synthesis.ribosomal... 0.27 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
CC GO:0015935 small ribosomal subunit ISS Arabidopsis.org
BP GO:0015979 photosynthesis RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0034660 ncRNA metabolic process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 96 190
No external refs found!