AT3G12500 (HCHIB, B-CHI,...)


Description : basic chitinase

Gene families : OG_01_0001170 (Gene family) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G12500
Cluster HCCA cluster: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Solyc02g082920.3.1 Solyc02g082920.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Solyc02g082930.3.1 Solyc02g082930.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IDA
MF GO:0004568 chitinase activity ISS
CC GO:0005576 extracellular region ISM
CC GO:0005773 vacuole IDA
CC GO:0005774 vacuolar membrane IDA
CC GO:0005829 cytosol IDA
BP GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway IGI
BP GO:0010167 response to nitrate RCA
BP GO:0015706 nitrate transport RCA
BP GO:0046686 response to cadmium ion IEP
BP GO:0050832 defense response to fungus IDA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 89 320
IPR001002 Chitin-bd_1 35 73
No external refs found!