Nbi_g20735


Description : not classified & original description: none


Gene families : OG0005083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20735
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Ala_g06008 ACBP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18458 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g42504 ACBP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g48938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06342 ESR, ESP, TASTY not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g10952 NSP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g28183 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g28672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35651 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g48465 ACBP4 not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR011498 Kelch_2 159 198
IPR001810 F-box_dom 11 55
No external refs found!