MA_7931826g0010


Description : Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana (sp|q66gp4|pp379_arath : 212.0)


Gene families : OG_01_0008241 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008241_tree ,
OG_02_0006918 (LandPlants) Phylogenetic Tree(s): OG_02_0006918_tree ,
OG_03_0004713 (SeedPlants) Phylogenetic Tree(s): OG_03_0004713_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_7931826g0010
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 Archaeplastida
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.07 Archaeplastida
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 Archaeplastida
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 LandPlants
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.02 LandPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 LandPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.02 LandPlants
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 SeedPlants
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.01 SeedPlants
Solyc04g008570.4.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 SeedPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 247 286
IPR002885 Pentatricopeptide_repeat 296 340
IPR002885 Pentatricopeptide_repeat 346 375
IPR002885 Pentatricopeptide_repeat 206 235
IPR002885 Pentatricopeptide_repeat 415 445
No external refs found!