Aliases : OLI5, RPL5A, PGY3, ATL5
Description : component *(uL18) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0002471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002471_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00162800 | OLI5, RPL5A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
AT3G25520 | OLI5, RPL5A, PGY3, ATL5 | ribosomal protein L5 | 0.15 | OrthoFinder output from all 47 species | |
AT5G39740 | OLI7, RPL5B | ribosomal protein L5 B | 0.12 | OrthoFinder output from all 47 species | |
Adi_g041241 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g102934 | OLI5, RPL5A, PGY3, ATL5 | component *(uL18) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g04462 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Als_g61861 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g23151 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0136.g050950 | OLI7, RPL5B | not classified & original description: CDS=209-979 | 0.07 | OrthoFinder output from all 47 species | |
Cba_g07470 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.24G049300.1 | OLI7, RPL5B,... | component *(uL18) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.24G050100.1 | OLI7, RPL5B,... | component *(uL18) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000194.49 | OLI7, RPL5B | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
Cre14.g621450 | OLI7, RPL5B | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g27299 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g34942 | OLI5, RPL5A, PGY3, ATL5 | component *(uL18) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Dde_g09355 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08236 | OLI5, RPL5A, PGY3, ATL5 | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038188001 | OLI7, RPL5B | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16695 | OLI7, RPL5B | component RPL5 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g67134.1 | OLI5, RPL5A,... | component RPL5 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
Len_g09553 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g21527 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
MA_70965g0010 | OLI7, RPL5B | component RPL5 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
Mp4g15800.1 | OLI7, RPL5B | component RPL5 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
Msp_g02730 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g05360 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g01232 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c1_7160V3.1 | OLI7, RPL5B, Pp3c1_7160 | ribosomal protein L5 B | 0.05 | OrthoFinder output from all 47 species | |
Pp3c7_25660V3.1 | OLI7, RPL5B, Pp3c7_25660 | ribosomal protein L5 B | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g16089 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0016.g006742 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g10501 | No alias | component *(uL18) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g12335 | No alias | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g20151 | No alias | component *(uL18) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
Sam_g20152 | No alias | component *(uL18) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g29764 | No alias | component *(uL18) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Smo144921 | OLI5, RPL5A, PGY3, ATL5 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
Solyc06g007670.4.1 | OLI5, RPL5A,... | component RPL5 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
Solyc06g082870.4.1 | OLI5, RPL5A,... | component RPL5 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g020130.3.1 | OLI7, RPL5B,... | component RPL5 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
Spa_g05892 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g15116 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
Spa_g38167 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
Spa_g43318 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g53510 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Tin_g01672 | OLI7, RPL5B | component *(uL18) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e000256_P001 | OLI5, RPL5A,... | component RPL5 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e018972_P001 | OLI5, RPL5A,... | component RPL5 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e028563_P004 | OLI5, RPL5A,... | component RPL5 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0008097 | 5S rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
No external refs found! |