Nbi_g20406 (OLI5, RPL5A, PGY3, ATL5)

Aliases : OLI5, RPL5A, PGY3, ATL5

Description : component *(uL18) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001726 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001726_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g20406

Target	Alias	Description	ECC score	Gene Family Method
Aev_g23295	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Ala_g04462	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Als_g38553	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Als_g61861	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Aop_g23151	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 39 species
Cba_g06227	No alias	not classified & original description: none	0.04	OrthoFinder output from all 39 species
Cba_g07470	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cba_g18660	OLI5, RPL5A, PGY3, ATL5	component *(uL18) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Ceric.24G050100.1	OLI7, RPL5B,...	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Dac_g27299	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species
Dde_g09355	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Len_g59208	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Lfl_g21527	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Msp_g02730	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Pir_g01232	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Smo144921	OLI5, RPL5A, PGY3, ATL5	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 39 species
Spa_g05892	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 39 species
Spa_g15116	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 39 species
Spa_g38167	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 39 species
Spa_g53510	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Tin_g01672	OLI7, RPL5B	component *(uL18) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008097	5S rRNA binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005485	Rbsml_L5_euk/L18_arc	55	216
IPR025607	Rbsml_L5e_C	276	294

External Links

No external refs found!

Nbi_g20406 (OLI5, RPL5A, PGY3, ATL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation