Nbi_g20277


Description : not classified & original description: none


Gene families : OG0002536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002536_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20277

Target Alias Description ECC score Gene Family Method Actions
Adi_g079740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044560 No alias not classified & original description: CDS=80-2332 0.04 OrthoFinder output from all 47 species
Cba_g25410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023557 No alias not classified & original description: CDS=146-3856 0.03 OrthoFinder output from all 47 species
Sam_g04294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!