Nbi_g20274 (OTP86)


Aliases : OTP86

Description : not classified & original description: none


Gene families : OG0019768 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0019768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20274
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g067292 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g48811 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g55749 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g13913 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 593 639
IPR002885 Pentatricopeptide_repeat 188 235
IPR002885 Pentatricopeptide_repeat 391 438
IPR002885 Pentatricopeptide_repeat 289 336
IPR002885 Pentatricopeptide_repeat 88 136
IPR002885 Pentatricopeptide_repeat 492 538
IPR046848 E_motif 711 756
No external refs found!