Nbi_g20273


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20273

Target Alias Description ECC score Gene Family Method Actions
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 OrthoFinder output from all 47 species
Adi_g003303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g069053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34629 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06798 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g10279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16836 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31186 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36194 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37274 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g30853 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene72589.t1 MEF22, Aspi01Gene72589 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007441 No alias not classified & original description: CDS=1-1959 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011626 CRR22 not classified & original description: CDS=1-2025 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012300 No alias not classified & original description: CDS=1-1938 0.02 OrthoFinder output from all 47 species
Azfi_s0077.g038002 No alias not classified & original description: CDS=1-2019 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054647 No alias not classified & original description: CDS=1-2919 0.02 OrthoFinder output from all 47 species
Azfi_s0171.g055668 No alias not classified & original description: CDS=1-711 0.02 OrthoFinder output from all 47 species
Azfi_s4087.g117953 CRR22 not classified & original description: CDS=1-597 0.02 OrthoFinder output from all 47 species
Cba_g19909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.03 OrthoFinder output from all 47 species
Dac_g43623 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g16461 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30825 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g44017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g08448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08705 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_121512g0010 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
MA_16226g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g28097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04351 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63391 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05062 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05872 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10282 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14215 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44238 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 542 562
IPR002885 Pentatricopeptide_repeat 440 463
IPR002885 Pentatricopeptide_repeat 643 667
IPR002885 Pentatricopeptide_repeat 340 362
IPR002885 Pentatricopeptide_repeat 63 89
IPR002885 Pentatricopeptide_repeat 263 310
IPR002885 Pentatricopeptide_repeat 568 615
IPR002885 Pentatricopeptide_repeat 365 412
IPR002885 Pentatricopeptide_repeat 162 209
IPR002885 Pentatricopeptide_repeat 465 512
No external refs found!