AT1G14790 (ATRDRP1, RDR1)

Aliases : ATRDRP1, RDR1

Description : RNA-dependent RNA polymerase 1

Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0002293 (LandPlants) Phylogenetic Tree(s): OG_02_0002293_tree ,
OG_03_0004327 (SeedPlants) Phylogenetic Tree(s): OG_03_0004327_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT1G14790
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007792001 No alias RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.04 Archaeplastida
MA_20320g0020 No alias RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_873737g0010 No alias Probable RNA-dependent RNA polymerase SHL2 OS=Oryza... 0.03 Archaeplastida
Solyc04g014870.3.1 No alias ssRNA polymerase (RDR6) 0.03 Archaeplastida
Zm00001e007872_P002 No alias ssRNA polymerase (RDR2) 0.02 LandPlants

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Interproscan
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0009615 response to virus IMP Interproscan
BP GO:0009617 response to bacterium RCA Interproscan
BP GO:0009751 response to salicylic acid IEP Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
BP GO:0010025 wax biosynthetic process IGI Interproscan
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0016441 posttranscriptional gene silencing ISS Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
BP GO:0035304 regulation of protein dephosphorylation RCA Interproscan
BP GO:0060148 positive regulation of posttranscriptional gene silencing IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 372 931
No external refs found!