AT3G06700


Description : Ribosomal L29e protein family


Gene families : OG_01_0002717 (Gene family) Phylogenetic Tree(s): OG0002717_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G06700
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cre03.g207050 No alias 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.13 Gene family
GSVIVT01035023001 No alias 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.11 Gene family
LOC_Os01g19840 Os01g0304000 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.11 Gene family
LOC_Os05g28750 Os05g0355500 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.12 Gene family
Smo228166 PACid_15405387 No description available 0.09 Gene family
Solyc05g053440.3.1 Solyc05g053440.3 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.18 Gene family
Zm00001d009117 GRMZM2G009894 No description available 0.02 Gene family
Zm00001d010030 GRMZM2G149975 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.17 Gene family
Zm00001d037972 GRMZM2G068496 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.12 Gene family
Zm00001d040617 GRMZM2G147791 29.2.1.2.2.29 protein.synthesis.ribosomal... 0.09 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0009853 photorespiration RCA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 3 42
No external refs found!