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  5. Nbi_g20199

Nbi_g20199 (OTP86)


Aliases : OTP86

Description : not classified & original description: none


Gene families : OG0007089 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0007089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20199

Target Alias Description ECC score Gene Family Method Actions
Als_g20449 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Aspi01Gene71452.t1 Aspi01Gene71452 not classified & original description: none 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 166 222
IPR002885 Pentatricopeptide_repeat 820 844
IPR002885 Pentatricopeptide_repeat 416 443
IPR002885 Pentatricopeptide_repeat 444 474
IPR002885 Pentatricopeptide_repeat 341 388
IPR002885 Pentatricopeptide_repeat 746 793
IPR002885 Pentatricopeptide_repeat 543 591
IPR002885 Pentatricopeptide_repeat 645 692
IPR002885 Pentatricopeptide_repeat 240 287
IPR032867 DYW_dom 973 1043
IPR046848 E_motif 865 916
No external refs found!