AT3G06400 (CHR11)


Aliases : CHR11

Description : chromatin-remodeling protein 11


Gene families : OG_01_0000140 (Gene family) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G06400
Cluster HCCA cluster: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.25 No alias 28.1 DNA.synthesis/chromatin structure Encodes a... 0.02 Gene family
Cpa|evm.model.tig00021275.25 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.01 Gene family
Cre08.g377200 No alias No description available 0.02 Gene family
GSVIVT01017921001 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
GSVIVT01037235001 No alias 28.1 DNA.synthesis/chromatin structure chromatin... 0.02 Gene family
Solyc02g085390.3.1 Solyc02g085390.3 No description available 0.02 Gene family
Zm00001d006428 GRMZM2G181158,... 28.1 DNA.synthesis/chromatin structure chromatin... 0.02 Gene family
Zm00001d045635 GRMZM2G472428 27.3.44 RNA.regulation of transcription.Chromatin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
MF GO:0008094 DNA-dependent ATPase activity ISS Arabidopsis.org
BP GO:0008284 positive regulation of cell proliferation RCA Arabidopsis.org
BP GO:0009553 embryo sac development IMP Arabidopsis.org
BP GO:0009630 gravitropism RCA Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem IGI Arabidopsis.org
BP GO:0016049 cell growth IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015195 SLIDE 897 1007
IPR000330 SNF2_N 202 469
IPR001650 Helicase_C 492 604
IPR015194 ISWI_HAND-dom 754 832
No external refs found!