AT3G06330


Description : RING/U-box superfamily protein


Gene families : OG_01_0001042 (Gene family) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G06330
Cluster HCCA cluster: Cluster_462

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017826001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_10433414g0020 No alias No description available 0.01 Gene family
MA_10436661g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo163014 PACid_15404363 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo438472 PACid_15421135 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc07g044780.3.1 Solyc07g044780.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005794 Golgi apparatus ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 218 264
No external refs found!