AT3G05620


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_01_0000075 (Gene family) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G05620
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027652001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
GSVIVT01031164001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.16 Gene family
LOC_Os01g13320 Os01g0234300,... 10.8.1 cell wall.pectin*esterases.PME Plant... 0.01 Gene family
LOC_Os01g15039 Os01g0254300 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
LOC_Os01g21034 Os01g0312500 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.03 Gene family
LOC_Os01g57854 Os01g0788400 10.8.1 cell wall.pectin*esterases.PME methylesterase PCR... 0.02 Gene family
LOC_Os07g47830 Os07g0675100 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.03 Gene family
MA_10434624g0020 No alias 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.02 Gene family
MA_2017g0010 No alias 10.8.1 cell wall.pectin*esterases.PME pectin... 0.03 Gene family
Solyc03g123630.3.1 Solyc03g123630.3 No description available 0.02 Gene family
Solyc09g075350.3.1 Solyc09g075350.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
Zm00001d008334 GRMZM2G017555 10.8.1 cell wall.pectin*esterases.PME Plant... 0.11 Gene family

Type GO Term Name Evidence Source
CC GO:0009505 plant-type cell wall ISS Arabidopsis.org
MF GO:0030599 pectinesterase activity ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 240 526
IPR006501 Pectinesterase_inhib_dom 35 197
No external refs found!