AT3G05590 (RPL18)

Aliases : RPL18

Description : ribosomal protein L18

Gene families : OG_01_0001845 (Gene family) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G05590
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000142.18 No alias protein.synthesis.ribosomal... 0.38 Gene family
Cre12.g512600 No alias protein.synthesis.ribosomal... 0.34 Gene family
GSVIVT01028036001 No alias protein.synthesis.ribosomal... 0.26 Gene family
GSVIVT01031168001 No alias protein.synthesis.ribosomal... 0.32 Gene family
GSVIVT01035120001 No alias protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os03g22180 Os03g0341100 protein.synthesis.ribosomal... 0.31 Gene family
LOC_Os05g06310 Os05g0155100 protein.synthesis.ribosomal... 0.42 Gene family
LOC_Os07g47780 Os07g0674700 protein.synthesis.ribosomal... 0.32 Gene family
MA_5395g0020 No alias protein.synthesis.ribosomal... 0.02 Gene family
Smo267976 PACid_15415191 No description available 0.3 Gene family
Solyc01g099900.3.1 Solyc01g099900.3 protein.synthesis.ribosomal... 0.28 Gene family
Solyc09g075290.3.1 Solyc09g075290.3 protein.synthesis.ribosomal... 0.41 Gene family
Zm00001d009848 GRMZM2G104025 protein.synthesis.ribosomal... 0.46 Gene family
Zm00001d022462 GRMZM2G322413 protein.synthesis.ribosomal... 0.35 Gene family
Zm00001d037603 GRMZM5G803952 protein.synthesis.ribosomal... 0.37 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS
MF GO:0003735 structural constituent of ribosome TAS
MF GO:0005515 protein binding IPI
CC GO:0005737 cytoplasm ISM
CC GO:0005773 vacuole IDA
CC GO:0005774 vacuolar membrane IDA
CC GO:0005886 plasma membrane IDA
BP GO:0006412 translation ISS
BP GO:0006412 translation TAS
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA
CC GO:0009507 chloroplast IDA
CC GO:0015934 large ribosomal subunit IDA
CC GO:0015934 large ribosomal subunit ISS
CC GO:0015934 large ribosomal subunit TAS
CC GO:0022625 cytosolic large ribosomal subunit IDA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 187
No external refs found!