AT3G05590 (RPL18)


Aliases : RPL18

Description : ribosomal protein L18


Gene families : OG_01_0001845 (Gene family) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G05590
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000142.18 No alias 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.38 Gene family
Cre12.g512600 No alias 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.34 Gene family
GSVIVT01028036001 No alias 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.26 Gene family
GSVIVT01031168001 No alias 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.32 Gene family
GSVIVT01035120001 No alias 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os03g22180 Os03g0341100 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.31 Gene family
LOC_Os05g06310 Os05g0155100 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.42 Gene family
LOC_Os07g47780 Os07g0674700 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.32 Gene family
MA_5395g0020 No alias 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.02 Gene family
Smo267976 PACid_15415191 No description available 0.3 Gene family
Solyc01g099900.3.1 Solyc01g099900.3 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.28 Gene family
Solyc09g075290.3.1 Solyc09g075290.3 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.41 Gene family
Zm00001d009848 GRMZM2G104025 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.46 Gene family
Zm00001d022462 GRMZM2G322413 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.35 Gene family
Zm00001d037603 GRMZM5G803952 29.2.1.2.2.18 protein.synthesis.ribosomal... 0.37 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
MF GO:0003735 structural constituent of ribosome TAS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0006412 translation TAS Arabidopsis.org
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0015934 large ribosomal subunit IDA Arabidopsis.org
CC GO:0015934 large ribosomal subunit ISS Arabidopsis.org
CC GO:0015934 large ribosomal subunit TAS Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 187
No external refs found!