AT3G05090 (LRS1)

Aliases : LRS1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0003308 (Gene family) Phylogenetic Tree(s): OG0003308_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G05090
Cluster HCCA cluster: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g06810 Os12g0165000 35.1 not ontology Encodes a DCAF protein. ... 0.02 Gene family
Zm00001d023520 GRMZM2G167999 35.1 not ontology Encodes a DCAF protein. ... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS
CC GO:0005634 nucleus ISM
BP GO:0006487 protein N-linked glycosylation RCA
BP GO:0006635 fatty acid beta-oxidation RCA
BP GO:0010311 lateral root formation IMP
BP GO:0016558 protein import into peroxisome matrix RCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 34 67
IPR001680 WD40_repeat 210 241
IPR001680 WD40_repeat 76 111
IPR001680 WD40_repeat 116 155
IPR001680 WD40_repeat 288 323
IPR001680 WD40_repeat 248 283
IPR021772 DUF3337 606 748
No external refs found!