Description : RING/U-box superfamily protein
Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): AT3G03550 | |
Cluster | HCCA cluster: Cluster_201 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G37580 | No alias | RING/U-box superfamily protein | 0.03 | Gene family | |
AT2G42360 | No alias | RING/U-box superfamily protein | 0.04 | Gene family | |
AT3G60220 | ATL4, TL4 | TOXICOS EN LEVADURA 4 | 0.04 | Gene family | |
AT5G66070 | No alias | RING/U-box superfamily protein | 0.03 | Gene family | |
LOC_Os02g52210 | Os02g0759400 | No description available | 0.03 | Gene family | |
LOC_Os05g29676 | Os05g0359833 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
LOC_Os06g08820 | Os06g0187300 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.04 | Gene family | |
LOC_Os06g12560 | Os06g0231600 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.02 | Gene family | |
LOC_Os06g16060 | Os06g0271600 | No description available | 0.03 | Gene family | |
LOC_Os08g43670 | Os08g0550400 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.02 | Gene family | |
LOC_Os09g29310 | Os09g0468300 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.02 | Gene family | |
LOC_Os10g41660 | Os10g0566400 | No description available | 0.04 | Gene family | |
MA_10436028g0010 | No alias | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
MA_117647g0010 | No alias | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
MA_129306g0010 | No alias | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
MA_201864g0010 | No alias | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.04 | Gene family | |
MA_786911g0010 | No alias | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.05 | Gene family | |
Solyc00g217960.1.1 | Solyc00g217960.1 | No description available | 0.05 | Gene family | |
Solyc01g066430.3.1 | Solyc01g066430.3 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
Solyc02g082420.3.1 | Solyc02g082420.3 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 | 0.03 | Gene family | |
Solyc02g083400.3.1 | Solyc02g083400.3 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
Solyc04g014220.1.1 | Solyc04g014220.1 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.04 | Gene family | |
Solyc06g049030.3.1 | Solyc06g049030.3 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
Solyc09g010650.1.1 | Solyc09g010650.1 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
Solyc09g066300.2.1 | Solyc09g066300.2 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.06 | Gene family | |
Solyc09g089890.1.1 | Solyc09g089890.1 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.05 | Gene family | |
Zm00001d007609 | GRMZM2G041549 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.04 | Gene family | |
Zm00001d016140 | GRMZM2G358711 | No description available | 0.02 | Gene family | |
Zm00001d017678 | GRMZM2G004480 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.05 | Gene family | |
Zm00001d018823 | GRMZM2G029623 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.04 | Gene family | |
Zm00001d027685 | GRMZM2G056804 | No description available | 0.02 | Gene family | |
Zm00001d043050 | GRMZM2G426613 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
Zm00001d045051 | GRMZM2G478553 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.03 | Gene family | |
Zm00001d045077 | GRMZM2G151913 | 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... | 0.04 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | ISM | Arabidopsis.org |
MF | GO:0008270 | zinc ion binding | ISS | Arabidopsis.org |
BP | GO:0080167 | response to karrikin | IEP | Arabidopsis.org |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 158 | 201 |
No external refs found! |