Nbi_g19744


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19744
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Ala_g06418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04245 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30578 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30893 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09716 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25715 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0093.g043186 No alias not classified & original description: CDS=1-3252 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19892 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67869 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67874 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.05 OrthoFinder output from all 47 species
Ceric.15G076300.1 Ceric.15G076300 not classified & original description: pacid=50639367... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.21G077300.1 Ceric.21G077300 not classified & original description: pacid=50604263... 0.03 OrthoFinder output from all 47 species
Ceric.23G032200.1 Ceric.23G032200 not classified & original description: pacid=50610511... 0.04 OrthoFinder output from all 47 species
Ceric.23G037900.1 Ceric.23G037900 not classified & original description: pacid=50609724... 0.03 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dde_g02319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g14206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10319 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15348 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16863 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18166 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19560 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45103 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g17847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13474 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26551 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 350 397
IPR002885 Pentatricopeptide_repeat 238 285
IPR002885 Pentatricopeptide_repeat 580 626
IPR002885 Pentatricopeptide_repeat 805 852
IPR002885 Pentatricopeptide_repeat 138 184
IPR002885 Pentatricopeptide_repeat 695 743
IPR002885 Pentatricopeptide_repeat 554 577
IPR002885 Pentatricopeptide_repeat 469 499
IPR002885 Pentatricopeptide_repeat 982 1006
No external refs found!