Nbi_g19716


Description : component *(uL3) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000487 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000487_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19716
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Adi_g003743 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Adi_g003815 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Adi_g017112 RP1, RPL3A, emb2207, ARP1 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Adi_g017594 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Adi_g020003 RP1, RPL3A, emb2207, ARP1 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g033737 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Adi_g047042 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Adi_g048805 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g069205 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Adi_g079077 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Adi_g098412 RP1, RPL3A, emb2207, ARP1 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Adi_g112961 RPL3B, ARP2 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Adi_g112973 RPL3B, ARP2 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g113740 RP1, RPL3A, emb2207, ARP1 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g117052 RPL3B, ARP2 not classified & original description: none 0.12 OrthoFinder output from all 39 species
Adi_g128082 RPL3B, ARP2 not classified & original description: none 0.06 OrthoFinder output from all 39 species
Adi_g128672 RPL3B, ARP2 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g37984 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Als_g23621 RP1, RPL3A, emb2207, ARP1 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Als_g51783 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Als_g58887 No alias not classified & original description: none 0.07 OrthoFinder output from all 39 species
Als_g60063 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g37548 No alias component *(uL3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Aop_g35351 No alias component *(uL3) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 39 species
Aop_g59392 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Aop_g59437 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Azfi_s4194.g118313 RP1, RPL3A, emb2207, ARP1 not classified & original description: CDS=1-696 0.02 OrthoFinder output from all 39 species
Cba_g66861 RPL3B, ARP2 not classified & original description: none 0.06 OrthoFinder output from all 39 species
Cba_g68135 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 39 species
Dde_g30026 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Mp1g18990.1 RPL3B, ARP2 component RPL3 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Ppi_g33623 RPL3B, ARP2 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Ppi_g57387 No alias component *(uL3) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Ppi_g63764 RP1, RPL3A, emb2207, ARP1 component *(uL3) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 39 species
Sam_g14979 No alias component *(uL3) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Tin_g38315 RPL3B, ARP2 component *(uL3) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Tin_g41966 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!