AT3G01480 (ATCYP38, CYP38)


Aliases : ATCYP38, CYP38

Description : cyclophilin 38


Gene families : OG_01_0005310 (Gene family) Phylogenetic Tree(s): OG0005310_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT3G01480
Cluster HCCA cluster: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.20 No alias No description available 0.01 Gene family
Cre03.g189800 No alias 29.6 protein.folding Encodes a chloroplast cyclophilin... 0.06 Gene family
GSVIVT01032488001 No alias No description available 0.15 Gene family
LOC_Os08g29370 Os08g0382400 No description available 0.09 Gene family
MA_7732g0010 No alias No description available 0.1 Gene family
Solyc02g086910.3.1 Solyc02g086910.3 No description available 0.21 Gene family
Solyc02g086915.1.1 Solyc02g086915.1 No description available 0.18 Gene family
Zm00001d032331 GRMZM2G015967 No description available 0.11 Gene family

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Arabidopsis.org
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Arabidopsis.org
BP GO:0006098 pentose-phosphate shunt RCA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006457 protein folding ISS Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009534 chloroplast thylakoid IDA Arabidopsis.org
CC GO:0009535 chloroplast thylakoid membrane IDA Arabidopsis.org
CC GO:0009543 chloroplast thylakoid lumen IDA Arabidopsis.org
CC GO:0009543 chloroplast thylakoid lumen ISS Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
CC GO:0009579 thylakoid IDA Arabidopsis.org
BP GO:0009595 detection of biotic stimulus RCA Arabidopsis.org
BP GO:0009657 plastid organization RCA Arabidopsis.org
BP GO:0009697 salicylic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009773 photosynthetic electron transport in photosystem I RCA Arabidopsis.org
BP GO:0009814 defense response, incompatible interaction RCA Arabidopsis.org
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0010103 stomatal complex morphogenesis RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0010207 photosystem II assembly IMP Arabidopsis.org
BP GO:0010207 photosystem II assembly RCA Arabidopsis.org
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0016117 carotenoid biosynthetic process RCA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0019684 photosynthesis, light reaction RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
CC GO:0031977 thylakoid lumen IDA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
BP GO:0042549 photosystem II stabilization IMP Arabidopsis.org
BP GO:0042742 defense response to bacterium IEP Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
BP GO:0043900 regulation of multi-organism process RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0050832 defense response to fungus RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 258 415
No external refs found!