AT2G47980 (SCC3, ATSCC3)


Aliases : SCC3, ATSCC3

Description : sister-chromatid cohesion protein 3


Gene families : OG_01_0002709 (Gene family) Phylogenetic Tree(s): OG0002709_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G47980
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011020001 No alias 35.2 not assigned.unknown Essential to the monopolar... 0.03 Gene family
LOC_Os05g09620 Os05g0188500 35.2 not assigned.unknown Essential to the monopolar... 0.02 Gene family
Solyc05g026510.3.1 Solyc05g026510.3 35.2 not assigned.unknown Essential to the monopolar... 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0000003 reproduction RCA Arabidopsis.org
BP GO:0000226 microtubule cytoskeleton organization RCA Arabidopsis.org
BP GO:0000278 mitotic cell cycle RCA Arabidopsis.org
BP GO:0000911 cytokinesis by cell plate formation RCA Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005694 chromosome IDA Arabidopsis.org
BP GO:0006325 chromatin organization RCA Arabidopsis.org
BP GO:0006396 RNA processing RCA Arabidopsis.org
BP GO:0006635 fatty acid beta-oxidation RCA Arabidopsis.org
BP GO:0007129 synapsis RCA Arabidopsis.org
BP GO:0007131 reciprocal meiotic recombination RCA Arabidopsis.org
BP GO:0009630 gravitropism RCA Arabidopsis.org
BP GO:0009887 animal organ morphogenesis RCA Arabidopsis.org
BP GO:0009888 tissue development RCA Arabidopsis.org
BP GO:0010090 trichome morphogenesis RCA Arabidopsis.org
BP GO:0010564 regulation of cell cycle process RCA Arabidopsis.org
BP GO:0010638 positive regulation of organelle organization RCA Arabidopsis.org
BP GO:0016558 protein import into peroxisome matrix RCA Arabidopsis.org
BP GO:0033044 regulation of chromosome organization RCA Arabidopsis.org
BP GO:0051455 attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation IMP Arabidopsis.org
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013721 STAG 144 251
No external refs found!