AT2G47520 (HRE2)


Aliases : HRE2

Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G47520
Cluster HCCA cluster: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.05 Gene family
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.03 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.04 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT5G44210 ATERF-9, ERF9, ATERF9 erf domain protein 9 0.07 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01005747001 No alias No description available 0.03 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01036228001 No alias No description available 0.03 Gene family
LOC_Os01g54890 Os01g0752500 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10430231g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_10431529g0010 No alias No description available 0.03 Gene family
MA_13408g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_23847g0010 No alias No description available 0.03 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.03 Gene family
Solyc06g053240.3.1 Solyc06g053240.3 No description available 0.03 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.05 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.05 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.07 Gene family
Zm00001d008968 GRMZM2G044077 No description available 0.07 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d020043 GRMZM2G363052 No description available 0.04 Gene family
Zm00001d022461 GRMZM2G025062 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0034059 response to anoxia IGI Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 50 98
No external refs found!