AT2G46340 (SPA1)


Aliases : SPA1

Description : SPA (suppressor of phyA-105) protein family


Gene families : OG_01_0001970 (Gene family) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G46340
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g49590 Os05g0571000 No description available 0.03 Gene family
Smo98534 PACid_15414457 No description available 0.02 Gene family
Solyc08g081990.3.1 Solyc08g081990.3 No description available 0.04 Gene family
Solyc12g013840.2.1 Solyc12g013840.2 No description available 0.06 Gene family
Zm00001d011746 GRMZM2G061602 No description available 0.03 Gene family
Zm00001d043592 GRMZM2G079904 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005834 heterotrimeric G-protein complex ISS Arabidopsis.org
BP GO:0006281 DNA repair RCA Arabidopsis.org
BP GO:0009585 red, far-red light phototransduction IGI Arabidopsis.org
BP GO:0009640 photomorphogenesis IMP Arabidopsis.org
BP GO:0009658 chloroplast organization IMP Arabidopsis.org
BP GO:0010017 red or far-red light signaling pathway IMP Arabidopsis.org
BP GO:0010100 negative regulation of photomorphogenesis IMP Arabidopsis.org
BP GO:0010100 negative regulation of photomorphogenesis RCA Arabidopsis.org
BP GO:0010114 response to red light IEP Arabidopsis.org
BP GO:0010218 response to far red light IEP Arabidopsis.org
MF GO:0042802 identical protein binding IPI Arabidopsis.org
BP GO:0048575 short-day photoperiodism, flowering IMP Arabidopsis.org
BP GO:0048608 reproductive structure development RCA Arabidopsis.org
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Arabidopsis.org
BP GO:2000028 regulation of photoperiodism, flowering IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 889 921
IPR001680 WD40_repeat 802 837
No external refs found!