AT2G45650 (AGL6)


Aliases : AGL6

Description : AGAMOUS-like 6


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G45650
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G13790 AGL15 AGAMOUS-like 15 0.03 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
GSVIVT01010221001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
GSVIVT01015641001 No alias 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01025945001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01027577001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01035477001 No alias 33.99 development.unspecified Encodes a member of the... 0.02 Gene family
LOC_Os04g49150 Os04g0580700 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os06g11970 Os06g0223300 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os06g23950 Os06g0347700 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Smo113962 PACid_15420129 No description available 0.02 Gene family
Smo121275 PACid_15416177 No description available 0.02 Gene family
Smo69980 PACid_15421122 No description available 0.01 Gene family
Solyc05g012020.3.1 Solyc05g012020.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc05g015750.3.1 Solyc05g015750.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d006094 GRMZM2G129034 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d017614 GRMZM2G160565 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d021057 GRMZM2G097059 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d028217 GRMZM2G032070,... 33.99 development.unspecified MADS-box protein, binds K... 0.03 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d037737 GRMZM2G052890 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d042591 GRMZM2G018589 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d048082 GRMZM2G102161 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0009911 positive regulation of flower development IMP Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem IMP Arabidopsis.org
BP GO:0048437 floral organ development IMP Arabidopsis.org
BP GO:0048481 plant ovule development RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 83 170
IPR002100 TF_MADSbox 10 57
No external refs found!