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  5. Nbi_g19235

Nbi_g19235


Description : subunit zeta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0003673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19235

Target Alias Description ECC score Gene Family Method Actions
AT4G08520 No alias SNARE-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g004247 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g02767 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g31273 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aob_g01485 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aop_g01931 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Ceric.25G075600.1 Ceric.25G075600 subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.67 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Cre08.g371450 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Dac_g06388 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Dcu_g14889 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Ehy_g21225 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016804001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Gb_26280 No alias subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
LOC_Os02g21250.1 LOC_Os02g21250 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
LOC_Os05g38610.1 LOC_Os05g38610 subunit zeta of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Len_g58112 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Lfl_g30792 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Mp1g05960.1 No alias subunit zeta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Pp3c4_17280V3.1 Pp3c4_17280 SNARE-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002385 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo442701 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Solyc02g071170.3.1 Solyc02g071170 subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Solyc12g044910.2.1 Solyc12g044910 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g14691 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Spa_g14692 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Spa_g51092 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Tin_g06378 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Zm00001e027247_P001 Zm00001e027247 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 57 199
No external refs found!