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  5. Nbi_g19186

Nbi_g19186


Description : histone demethylase *(KDM3) & original description: none


Gene families : OG0006253 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0006253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19186

Target Alias Description ECC score Gene Family Method Actions
Als_g13519 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 39 species
Aob_g20572 No alias histone demethylase *(KDM3) & original description: none 0.01 OrthoFinder output from all 39 species
Len_g02233 No alias histone demethylase *(KDM3) & original description: none 0.01 OrthoFinder output from all 39 species
Len_g08650 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 39 species
Pp3c4_21970V3.1 Pp3c4_21970 transcription factor jumonji (jmjC) domain-containing protein 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 960 1056
IPR014977 WRC_dom 4 41
No external refs found!