AT2G43620


Description : Chitinase family protein


Gene families : OG_01_0000294 (Gene family) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G43620
Cluster HCCA cluster: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT2G43580 No alias Chitinase family protein 0.02 Gene family
GSVIVT01038111001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.06 Gene family
GSVIVT01038120001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
LOC_Os02g39330 Os02g0605900 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
LOC_Os10g39700 Os10g0543400 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
MA_159244g0020 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
MA_295712g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
MA_448160g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
MA_741127g0010 No alias 20.1 stress.biotic Chitinase family protein 0.04 Gene family
MA_7544918g0010 No alias 20.1 stress.biotic Chitinase family protein 0.02 Gene family
Smo426710 PACid_15410374 No description available 0.03 Gene family
Solyc06g053380.3.1 Solyc06g053380.3 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
Zm00001d017152 GRMZM2G129189 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
Zm00001d025753 GRMZM2G005633 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response RCA Arabidopsis.org
MF GO:0004568 chitinase activity ISS Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
BP GO:0006865 amino acid transport RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0015824 proline transport RCA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 30 64
IPR000726 Glyco_hydro_19_cat 94 228
IPR000726 Glyco_hydro_19_cat 237 283
No external refs found!