AT2G43120


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0001641 (Gene family) Phylogenetic Tree(s): OG0001641_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G43120
Cluster HCCA cluster: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.03 Gene family
Cre16.g674964 No alias 35.1 not assigned.no ontology RmlC-like cupins... 0.01 Gene family
GSVIVT01031671001 No alias 35.1 not assigned.no ontology RmlC-like cupins... 0.03 Gene family
GSVIVT01037758001 No alias 35.1 not assigned.no ontology RmlC-like cupins... 0.03 Gene family
Smo446995 PACid_15404009 35.1 not assigned.no ontology RmlC-like cupins... 0.05 Gene family
Solyc09g098180.3.1 Solyc09g098180.3 35.1 not assigned.no ontology RmlC-like cupins... 0.02 Gene family
Zm00001d032363 GRMZM2G101116 35.1 not assigned.no ontology RmlC-like cupins... 0.01 Gene family
Zm00001d034829 GRMZM2G016290 35.1 not assigned.no ontology RmlC-like cupins... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 58 148
IPR008778 Pirin_C_dom 201 311
No external refs found!