Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0011533 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011533_tree ,
OG_02_0011433 (LandPlants) Phylogenetic Tree(s): OG_02_0011433_tree ,
OG_03_0011536 (SeedPlants) Phylogenetic Tree(s): OG_03_0011536_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G13630 | |
Cluster | HCCA: Cluster_256 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00148p00070910 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
GSVIVT01010112001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
LOC_Os10g33874.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | Archaeplastida | |
MA_137810g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
AMTR_s00148p00070910 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | LandPlants | |
GSVIVT01010112001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | LandPlants | |
LOC_Os10g33874.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | LandPlants | |
MA_137810g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | LandPlants | |
AMTR_s00148p00070910 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | SeedPlants | |
GSVIVT01010112001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | SeedPlants | |
LOC_Os10g33874.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | SeedPlants |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005739 | mitochondrion | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 435 | 463 |
IPR002885 | Pentatricopeptide_repeat | 189 | 210 |
IPR002885 | Pentatricopeptide_repeat | 366 | 410 |
IPR002885 | Pentatricopeptide_repeat | 306 | 338 |
IPR002885 | Pentatricopeptide_repeat | 691 | 737 |
IPR002885 | Pentatricopeptide_repeat | 618 | 666 |
IPR002885 | Pentatricopeptide_repeat | 536 | 585 |
IPR002885 | Pentatricopeptide_repeat | 467 | 515 |
IPR002885 | Pentatricopeptide_repeat | 220 | 268 |
No external refs found! |