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  5. Nbi_g18988

Nbi_g18988


Description : not classified & original description: none


Gene families : OG0007989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18988

Target Alias Description ECC score Gene Family Method Actions
Adi_g015449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17113 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g08708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 765 838
IPR001650 Helicase_C 565 684
IPR014720 dsRBD_dom 145 206
IPR014720 dsRBD_dom 57 105
IPR011709 DEAD-box_helicase_OB_fold 922 1015
IPR011545 DEAD/DEAH_box_helicase_dom 337 494
No external refs found!