Nbi_g18971


Description : cohesin cofactor *(PDS5) & original description: none


Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18971

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00174980 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
AT1G77600 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g117140 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06778 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18795 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32765 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11522 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20243 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08128 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69987 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50189.t1 Aspi01Gene50189 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G037000.1 Ceric.11G037000 cohesin cofactor *(PDS5) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G009800.1 Ceric.34G009800 cohesin cofactor *(PDS5) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.37G021700.1 Ceric.37G021700 cohesin cofactor *(PDS5) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g032550 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g10056 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22023 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02974 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
GSVIVT01002824001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Gb_02487 No alias cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species
Gb_09525 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
LOC_Os06g17840.1 LOC_Os06g17840 cohesin cofactor (PDS5) 0.04 OrthoFinder output from all 47 species
Len_g22380 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46602 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09667 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426926g0010 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
MA_10433886g0010 No alias cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species
Msp_g26190 No alias cohesin cofactor *(PDS5) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g18717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14289 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20541 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51581 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57308 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59813 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003457 No alias cohesin cofactor *(PDS5) & original description: CDS=365-5053 0.05 OrthoFinder output from all 47 species
Sam_g14013 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18018 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g18046 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18111 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11324 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20983 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007658_P001 Zm00001e007658 cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species
Zm00001e015094_P002 Zm00001e015094 cohesin cofactor (PDS5) 0.06 OrthoFinder output from all 47 species
Zm00001e030989_P001 Zm00001e030989 cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!