AT2G41720 (EMB2654)


Aliases : EMB2654

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007648 (Gene family) Phylogenetic Tree(s): OG0007648_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G41720
Cluster HCCA cluster: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g11280 Os07g0213300 33.99 development.unspecified EMBRYO DEFECTIVE 2654 (EMB2654) 0.02 Gene family
MA_10429061g0010 No alias 33.99 development.unspecified EMBRYO DEFECTIVE 2654 (EMB2654) 0.03 Gene family
Solyc04g015950.2.1 Solyc04g015950.2 33.99 development.unspecified EMBRYO DEFECTIVE 2654 (EMB2654) 0.08 Gene family
Zm00001d021871 GRMZM2G158452 33.99 development.unspecified EMBRYO DEFECTIVE 2654 (EMB2654) 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy NAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 285 312
IPR002885 Pentatricopeptide_repeat 622 667
IPR002885 Pentatricopeptide_repeat 376 438
IPR002885 Pentatricopeptide_repeat 447 482
IPR002885 Pentatricopeptide_repeat 728 783
IPR002885 Pentatricopeptide_repeat 313 365
IPR002885 Pentatricopeptide_repeat 494 542
IPR002885 Pentatricopeptide_repeat 211 258
IPR002885 Pentatricopeptide_repeat 567 610
IPR002885 Pentatricopeptide_repeat 145 188
No external refs found!