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  5. Nbi_g18828

Nbi_g18828 (ATRGP1, RGP1)


Aliases : ATRGP1, RGP1

Description : UDP-L-arabinose mutase & original description: none


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18828
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT5G15650 RGP2, ATRGP2 reversibly glycosylated polypeptide 2 0.03 OrthoFinder output from all 47 species
Als_g38503 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0110.g045465 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=87-1109 0.05 OrthoFinder output from all 47 species
Cba_g03094 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G101600.1 ATRGP1, RGP1,... UDP-L-arabinose mutase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g04103 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Gb_21665 ATRGP1, RGP1 UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Gb_38716 No alias UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
LOC_Os03g40270.1 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
MA_7564826g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g10790.1 RGP3, RGP UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Smo140071 ATRGP1, RGP1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Smo76446 RGP2, ATRGP2 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 4 338
No external refs found!