AT2G41100 (TCH3, ATCAL4)


Aliases : TCH3, ATCAL4

Description : Calcium-binding EF hand family protein


Gene families : OG_01_0001334 (Gene family) Phylogenetic Tree(s): OG0001334_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G41100
Cluster HCCA cluster: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Solyc07g007950.1.1 Solyc07g007950.1 30.3 signalling.calcium A member of ARF GAP domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IDA Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0009266 response to temperature stimulus NAS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009612 response to mechanical stimulus IEP Arabidopsis.org
BP GO:0009612 response to mechanical stimulus RCA Arabidopsis.org
BP GO:0009646 response to absence of light IEP Arabidopsis.org
BP GO:0009646 response to absence of light RCA Arabidopsis.org
BP GO:0009652 thigmotropism IEP Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0019722 calcium-mediated signaling RCA Arabidopsis.org
BP GO:0043069 negative regulation of programmed cell death RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 73
IPR002048 EF_hand_dom 192 252
IPR002048 EF_hand_dom 102 162
No external refs found!