AT2G40350


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G40350
Cluster HCCA cluster: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
LOC_Os02g32040 Os02g0520000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.02 Gene family
LOC_Os07g47790 Os07g0674800 No description available 0.09 Gene family
LOC_Os09g20350 Os09g0369000,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_30120g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_7960347g0010 No alias No description available 0.01 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.02 Gene family
Zm00001d034605 GRMZM2G009598 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0010286 heat acclimation IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 65 115
No external refs found!