AT2G40260


Description : Homeodomain-like superfamily protein


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G40260
Cluster HCCA cluster: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Gene family
AT2G20400 No alias myb-like HTH transcriptional regulator family protein 0.02 Gene family
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Gene family
AT5G45580 No alias Homeodomain-like superfamily protein 0.04 Gene family
GSVIVT01000606001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01013085001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
GSVIVT01020827001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01021225001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
GSVIVT01026319001 No alias No description available 0.04 Gene family
LOC_Os02g14490 Os02g0241200 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
LOC_Os03g03760 Os03g0129800 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os09g12750 Os09g0299000 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
LOC_Os11g01480 Os11g0106100 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os12g01490 Os12g0105600 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_138039g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
MA_8183372g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_84935g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
MA_8865g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_937875g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Smo405704 PACid_15415391 No description available 0.02 Gene family
Solyc03g006150.2.1 Solyc03g006150.2 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
Solyc04g015290.3.1 Solyc04g015290.3 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc05g055940.3.1 Solyc05g055940.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc07g045000.3.1 Solyc07g045000.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc08g076400.3.1 Solyc08g076400.3 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc12g006280.2.1 Solyc12g006280.2 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d015407 GRMZM2G052544 No description available 0.04 Gene family
Zm00001d017702 GRMZM2G060834 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d027492 GRMZM5G887276 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
Zm00001d034181 GRMZM2G031870 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Zm00001d036638 GRMZM2G100709 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Zm00001d046947 GRMZM2G081671 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 85 135
No external refs found!